Ok, I have solved this problem....
bg1, tx1, etc etc are defined in Slide Master for a slide in element called Color Map. As for phClr is concerned, it a bit more involved... It is like this certain items (like borders and fills ) in style matrix use this colour to back reference to a scheme. For example if a table has a border which it is picking up from style matrix, it will specify color that will replace phClr. I shall put up an example some times soon.